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Ctse cathepsin E [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102015922, updated on 10-Mar-2024

Summary

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Gene symbol
Ctse
Gene description
cathepsin E
See related
Ensembl:ENSCLAG00000012938
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955406.1 (41641412..41653261, complement)

NW_004955406.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102007509 Neighboring gene RAB7B, member RAS oncogene family Neighboring gene uncharacterized LOC102007853 Neighboring gene regulator of hemoglobinization and erythroid cell expansion

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955406.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aspartic-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cathepsin E

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955406.1 Reference ChiLan1.0 Primary Assembly

    Range
    41641412..41653261 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005375382.2 → XP_005375439.1  cathepsin E isoform X2

    Conserved Domains (3) summary
    pfam00026
    Location:73 → 258
    Asp; Eukaryotic aspartyl protease
    pfam07966
    Location:21 → 49
    A1_Propeptide; A1 Propeptide
    cl11403
    Location:74 → 258
    pepsin_retropepsin_like; Cellular and retroviral pepsin-like aspartate proteases

  2. XM_005375381.2 → XP_005375438.1  cathepsin E isoform X1

    UniProtKB/TrEMBL
    A0A8C2YRY3, A0A8C2YRY6
    Related
    ENSCLAP00000018893.1, ENSCLAT00000019078.1
    Conserved Domains (3) summary
    pfam00026
    Location:73 → 389
    Asp; Eukaryotic aspartyl protease
    pfam07966
    Location:21 → 49
    A1_Propeptide; A1 Propeptide
    cl11403
    Location:74 → 388
    pepsin_retropepsin_like; Cellular and retroviral pepsin-like aspartate proteases
Nucleotide Protein
Heading Accession and Version

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