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Psmc6 proteasome 26S subunit, ATPase 6 [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102009582, updated on 10-Mar-2024

Summary

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Gene symbol
Psmc6
Gene description
proteasome 26S subunit, ATPase 6
See related
Ensembl:ENSCLAG00000013485
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955409.1 (10454210..10474872, complement)

NW_004955409.1Genomic Context describing neighboring genes Neighboring gene glucosamine-phosphate N-acetyltransferase 1 Neighboring gene serine/threonine/tyrosine interacting protein Neighboring gene endoplasmic reticulum oxidoreductase 1 alpha Neighboring gene G protein-coupled receptor 137C

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955409.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proteasome-activating activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of RNA polymerase II transcription preinitiation complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic proteasome complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome regulatory particle, base subcomplex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
26S protease regulatory subunit 10B
Names
proteasome (prosome, macropain) 26S subunit, ATPase, 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955409.1 Reference ChiLan1.0 Primary Assembly

    Range
    10454210..10474872 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005376779.2 → XP_005376836.1  26S protease regulatory subunit 10B

    See identical proteins and their annotated locations for XP_005376836.1

    UniProtKB/TrEMBL
    A0A8C2VRZ4, A0A8C2YSA8
    Related
    ENSCLAP00000019650.1, ENSCLAT00000019843.1
    Conserved Domains (1) summary
    COG1222
    Location:18 → 401
    RPT1; ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
Heading Accession and Version

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