U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Slbp stem-loop histone mRNA binding protein [ Microtus ochrogaster (prairie vole) ]

Gene ID: 101988583, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Slbp
Gene description
stem-loop histone mRNA binding protein
See related
Ensembl:ENSMOCG00000015826
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Slbp in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current MicOch1.0 (GCF_000317375.1) Unplaced Scaffold NW_004949104.1 (9027990..9041467)

NW_004949104.1Genomic Context describing neighboring genes Neighboring gene transforming acidic coiled-coil containing protein 3 Neighboring gene transmembrane protein 129, E3 ubiquitin ligase Neighboring gene family with sequence similarity 53 member A Neighboring gene NK1 homeobox 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_004949104 Unplaced Scaffold Reference MicOch1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone pre-mRNA stem-loop binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA 3'-end processing by stem-loop binding and cleavage IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mRNA transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of histone pre-mRNA 3'end processing complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
histone RNA hairpin-binding protein
Names
stem-loop binding protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NW_004949104.1 Reference MicOch1.0

    Range
    9027990..9041467
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013353359.2 → XP_013208813.1  histone RNA hairpin-binding protein isoform X2

    Conserved Domains (1) summary
    pfam15247
    Location:95 → 162
    SLBP_RNA_bind; Histone RNA hairpin-binding protein RNA-binding domain

  2. XM_005372472.3 → XP_005372529.2  histone RNA hairpin-binding protein isoform X1

    Related
    ENSMOCP00000017127.1, ENSMOCT00000020913.1
    Conserved Domains (2) summary
    pfam15247
    Location:130 → 197
    SLBP_RNA_bind; Histone RNA hairpin-binding protein RNA-binding domain
    pfam15297
    Location:39 → 102
    CKAP2_C; Cytoskeleton-associated protein 2 C-terminus
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.