U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Apcs amyloid P component, serum [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101969923, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Apcs
Gene description
amyloid P component, serum
Locus tag
H1C71_031655
See related
EnsemblRapid:ENSSTOG00015009420
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024405058.1 (5767140..5768100)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936740.1 (979007..987312, complement)

NW_024405058.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 10J1 Neighboring gene olfactory receptor 10J5 Neighboring gene uncharacterized LOC110599556 Neighboring gene uncharacterized LOC120890504 Neighboring gene C-reactive protein

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables complement component C1q complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
serum amyloid P-component

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024405058.1 Reference HiC_Itri_2 Primary Assembly

    Range
    5767140..5768100
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005339387.4 → XP_005339444.3  serum amyloid P-component

    UniProtKB/TrEMBL
    I3N3X1
    Related
    ENSSTOP00015011595.1, ENSSTOT00015012726.1
    Conserved Domains (1) summary
    smart00159
    Location:20 → 222
    PTX; Pentraxin / C-reactive protein / pentaxin family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.