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Acvrl1 activin A receptor like type 1 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101964950, updated on 8-Mar-2024

Summary

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Gene symbol
Acvrl1
Gene description
activin A receptor like type 1
Locus tag
H1C71_013235
See related
EnsemblRapid:ENSSTOG00015016893
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024404945.1 (63786735..63800651, complement)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936512.1 (9364551..9379131)

NW_024404945.1Genomic Context describing neighboring genes Neighboring gene activin A receptor type 1B Neighboring gene uncharacterized LOC120888308 Neighboring gene uncharacterized LOC120888309 Neighboring gene ankyrin repeat domain 33 Neighboring gene uncharacterized LOC110598120

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables SMAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transforming growth factor beta receptor activity, type I IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to growth factor stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dorsal/ventral pattern formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of BMP receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein kinase receptor R3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024404945.1 Reference HiC_Itri_2 Primary Assembly

    Range
    63786735..63800651 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005324974.4 → XP_005325031.1  serine/threonine-protein kinase receptor R3

    UniProtKB/TrEMBL
    I3LWQ1
    Conserved Domains (2) summary
    cd14142
    Location:197 → 494
    STKc_ACVR1_ALK1; Catalytic domain of the Serine/Threonine Kinases, Activin Type I Receptor and Activin receptor-Like Kinase 1
    pfam08515
    Location:174 → 201
    TGF_beta_GS; Transforming growth factor beta type I GS-motif

  2. XM_040280618.1 → XP_040136552.1  serine/threonine-protein kinase receptor R3

    UniProtKB/TrEMBL
    I3LWQ1
    Conserved Domains (2) summary
    cd14142
    Location:197 → 494
    STKc_ACVR1_ALK1; Catalytic domain of the Serine/Threonine Kinases, Activin Type I Receptor and Activin receptor-Like Kinase 1
    pfam08515
    Location:174 → 201
    TGF_beta_GS; Transforming growth factor beta type I GS-motif

  3. XM_040280619.1 → XP_040136553.1  serine/threonine-protein kinase receptor R3

    UniProtKB/TrEMBL
    I3LWQ1
    Related
    ENSSTOP00015020730.1, ENSSTOT00015022695.1
    Conserved Domains (2) summary
    cd14142
    Location:197 → 494
    STKc_ACVR1_ALK1; Catalytic domain of the Serine/Threonine Kinases, Activin Type I Receptor and Activin receptor-Like Kinase 1
    pfam08515
    Location:174 → 201
    TGF_beta_GS; Transforming growth factor beta type I GS-motif
Nucleotide Protein
Heading Accession and Version

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