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LINC02261 long intergenic non-protein coding RNA 2261 [ Homo sapiens (human) ]

Gene ID: 101929199, updated on 25-Jan-2022

Summary

Official Symbol
LINC02261provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2261provided by HGNC
Primary source
HGNC:HGNC:53173
See related
Ensembl:ENSG00000249699 AllianceGenome:HGNC:53173
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC02261 in Genome Data Viewer
Location:
4p15.2
Exon count:
6
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 4 NC_000004.12 (27217479..27282225)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (27219101..27283847)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene STIM2 antisense RNA 1 Neighboring gene PIMREG pseudogene 4 Neighboring gene stromal interaction molecule 2 Neighboring gene mitochondrial ribosomal protein L51 pseudogene 1 Neighboring gene immunoglobulin (CD79A) binding protein 1 pseudogene 5

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Common variants at 1p36 are associated with superior frontal gyrus volume.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_125921.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC024132
    Related
    ENST00000512873.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p13 Primary Assembly

    Range
    27217479..27282225
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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