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LINC01099 long intergenic non-protein coding RNA 1099 [ Homo sapiens (human) ]

Gene ID: 101928656, updated on 2-Mar-2021

Summary

Official Symbol
LINC01099provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1099provided by HGNC
Primary source
HGNC:HGNC:49222
See related
Ensembl:ENSG00000251504
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC01099 in Genome Data Viewer
Location:
4q34.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20210226 current GRCh38.p13 (GCF_000001405.39) 4 NC_000004.12 (177812046..177907936, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (178733200..178829090, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377559 Neighboring gene long intergenic non-protein coding RNA 1098 Neighboring gene uncharacterized LOC105377560 Neighboring gene uncharacterized LOC105377561 Neighboring gene RNA, U1 small nuclear 45, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_108092.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AC019170, AC021850
  2. NR_108093.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) contains an alternate 3' exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AC021850
    Related
    ENST00000514736.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210226

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p13 Primary Assembly

    Range
    177812046..177907936 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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