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HDAC4-AS1 HDAC4 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 101928111, updated on 14-Dec-2021

Summary

Official Symbol
HDAC4-AS1provided by HGNC
Official Full Name
HDAC4 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:54064
See related
Ensembl:ENSG00000222020
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in fat (RPKM 4.7), testis (RPKM 3.5) and 9 other tissues See more
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Genomic context

See HDAC4-AS1 in Genome Data Viewer
Location:
2q37.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (239401436..239402364)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (240323130..240324058)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene histone deacetylase 4 Neighboring gene microRNA 4269 Neighboring gene microRNA 2467 Neighboring gene long intergenic non-protein coding RNA 2991 Neighboring gene uncharacterized LOC105373966

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_135575.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC062017, BF434856
    Related
    ENST00000409526.1
  2. NR_135576.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC062017, AI653327
    Related
    ENST00000413029.2
  3. NR_135577.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC062017, BM704421
    Related
    ENST00000428471.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    239401436..239402364
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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