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HECW2-AS1 HECW2 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 101927482, updated on 25-Jan-2022

Summary

Official Symbol
HECW2-AS1provided by HGNC
Official Full Name
HECW2 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:54062
See related
AllianceGenome:HGNC:54062
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in placenta (RPKM 10.0), prostate (RPKM 6.7) and 7 other tissues See more
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Genomic context

See HECW2-AS1 in Genome Data Viewer
Location:
2q32.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (196260024..196264204)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (197124748..197128928)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene dynein axonemal heavy chain 7 Neighboring gene glutathione S-transferase alpha 5 pseudogene Neighboring gene uncharacterized LOC101927454 Neighboring gene serine/threonine kinase 17b Neighboring gene HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 Neighboring gene RNA, 7SL, cytoplasmic 820, pseudogene Neighboring gene Sharpr-MPRA regulatory region 6737

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110225.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AC020571
  2. NR_110226.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses alternate splice sites at two exons, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AC020571

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    196260024..196264204
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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