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RTCA RNA 3'-terminal phosphate cyclase [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 101925644, updated on 1-Aug-2024

Summary

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Gene symbol
RTCA
Gene description
RNA 3'-terminal phosphate cyclase
See related
Ensembl:ENSMFAG00000034132
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
RTCD1
Orthologs
human mouse all
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Genomic context

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See RTCA in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 1 NC_088375.1 (134111125..134136018, complement)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 1 NC_052255.1 (122398125..122423292, complement)

Chromosome 1 - NC_088375.1Genomic Context describing neighboring genes Neighboring gene cell division cycle 14A Neighboring gene pre-mRNA-splicing factor SPF27-like Neighboring gene keratinocyte-associated transmembrane protein 2-like Neighboring gene dihydrolipoamide branched chain transacylase E2 Neighboring gene leucine rich repeat containing 39 Neighboring gene tRNA methyltransferase 13 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Substitution rate and structural divergence of 5'UTR evolution: comparative analysis between human and cynomolgus monkey cDNAs. Osada N, et al. Mol Biol Evol, 2005 Oct. PMID 15944441
  2. Rate of evolution in brain-expressed genes in humans and other primates. Wang HY, et al. PLoS Biol, 2007 Feb. PMID 17194215, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA-3'-phosphate cyclase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA 3'-terminal phosphate cyclase
Names
RNA cyclase
RNA terminal phosphate cyclase domain-containing protein 1
RNA-3'-phosphate cyclase
XP_045222579.2
XP_045222581.2
XP_045222585.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088375.1 Reference T2T-MFA8v1.0

    Range
    134111125..134136018 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045366644.2 → XP_045222579.2  RNA 3'-terminal phosphate cyclase isoform X1

    UniProtKB/Swiss-Prot
    Q4R3J0
    UniProtKB/TrEMBL
    G7NV29

  2. XM_045366646.2 → XP_045222581.2  RNA 3'-terminal phosphate cyclase isoform X2

    UniProtKB/TrEMBL
    G7NV29

  3. XM_045366650.2 → XP_045222585.2  RNA 3'-terminal phosphate cyclase isoform X2

    UniProtKB/TrEMBL
    G7NV29

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001283155.1: Suppressed sequence

    Description
    NM_001283155.1: This RefSeq record was removed as a result of standard genome annotation processing. Contact info@ncbi.nlm.nih.gov for further information.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q4R3J0.1 GenPept UniProtKB/Swiss-Prot:Q4R3J0

Gene LinkOut

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