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CGB_H5300C Transcription corepressor, putative [ Cryptococcus gattii WM276 ]

Gene ID: 10185942, updated on 16-Nov-2023

Summary

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Gene symbol
CGB_H5300C
Gene description
Transcription corepressor, putative
Locus tag
CGB_H5300C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cryptococcus gattii WM276 (strain: WM276, serotype: B)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex
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Genomic context

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Location:
chromosome: H
Exon count:
13
Sequence:
Chromosome: H; NC_014945.1 (1128325..1131617, complement)

Chromosome H - NC_014945.1Genomic Context describing neighboring genes Neighboring gene Hypothetical Protein Neighboring gene Hypothetical protein Neighboring gene Hypothetical protein Neighboring gene Homoserine kinase, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014945.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts. D'Souza CA, et al. mBio, 2011. PMID 21304167, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of HIR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Transcription corepressor, putative
XP_003195954.1
  • Similar to TIGR gene model, INSD accession AAW45343.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014945.1 Reference assembly

    Range
    1128325..1131617 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003195906.1 → XP_003195954.1  Transcription corepressor, putative [Cryptococcus gattii WM276]

    See identical proteins and their annotated locations for XP_003195954.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D0WDJ4, E6RBD0
    Conserved Domains (5) summary
    COG2319
    Location:19 → 347
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:22 → 348
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam07569
    Location:628 → 813
    Hira; TUP1-like enhancer of split
    pfam12446
    Location:425 → 507
    DUF3682; Protein of unknown function (DUF3682)
    sd00039
    Location:22 → 71
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
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