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Pknox1 PBX/knotted 1 homeobox 1 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101705108, updated on 8-Mar-2024

Summary

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Gene symbol
Pknox1
Gene description
PBX/knotted 1 homeobox 1
Locus tag
GW7_21325
See related
Ensembl:ENSHGLG00000016151
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624745.1 (27696257..27754162, complement)

NW_004624745.1Genomic Context describing neighboring genes Neighboring gene U2 small nuclear RNA auxiliary factor 1 Neighboring gene cystathionine beta-synthase Neighboring gene oxysterol-binding protein-related protein 9 pseudogene Neighboring gene uncharacterized LOC110348671 Neighboring gene uncharacterized LOC110348672 Neighboring gene uncharacterized LOC110348673 Neighboring gene uncharacterized LOC110348623

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624745 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein PKNOX1
Names
Homeobox protein PKNOX1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624745.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    27696257..27754162 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004842428.3 → XP_004842485.1  homeobox protein PKNOX1 isoform X2

    UniProtKB/TrEMBL
    A0A0P6JBG7
    Conserved Domains (2) summary
    pfam05920
    Location:276 → 315
    Homeobox_KN; Homeobox KN domain
    pfam16493
    Location:80 → 164
    Meis_PKNOX_N; N-terminal of Homeobox Meis and PKNOX1

  2. XM_004842426.3 → XP_004842483.1  homeobox protein PKNOX1 isoform X1

    See identical proteins and their annotated locations for XP_004842483.1

    UniProtKB/TrEMBL
    G5B2V1
    Related
    ENSHGLP00000022643.1, ENSHGLT00000022857.1
    Conserved Domains (2) summary
    pfam05920
    Location:277 → 316
    Homeobox_KN; Homeobox KN domain
    pfam16493
    Location:80 → 164
    Meis_PKNOX_N; N-terminal of Homeobox Meis and PKNOX1

  3. XM_021256322.1 → XP_021111981.1  homeobox protein PKNOX1 isoform X1

    UniProtKB/TrEMBL
    G5B2V1
    Related
    ENSHGLP00000022644.1, ENSHGLT00000022858.1
    Conserved Domains (2) summary
    pfam05920
    Location:277 → 316
    Homeobox_KN; Homeobox KN domain
    pfam16493
    Location:80 → 164
    Meis_PKNOX_N; N-terminal of Homeobox Meis and PKNOX1

  4. XM_021256323.1 → XP_021111982.1  homeobox protein PKNOX1 isoform X1

    UniProtKB/TrEMBL
    G5B2V1
    Conserved Domains (2) summary
    pfam05920
    Location:277 → 316
    Homeobox_KN; Homeobox KN domain
    pfam16493
    Location:80 → 164
    Meis_PKNOX_N; N-terminal of Homeobox Meis and PKNOX1
Nucleotide Protein
Heading Accession and Version

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