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Nc73EF oxoglutarate dehydrogenase Nc73EF [ Ceratitis capitata (Mediterranean fruit fly) ]

Gene ID: 101453861, updated on 22-May-2024

Summary

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Gene symbol
Nc73EF
Gene description
oxoglutarate dehydrogenase Nc73EF
See related
EnsemblRapid:LOC101453861
Gene type
protein coding
RefSeq status
MODEL
Organism
Ceratitis capitata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Ceratitis; Ceratitis
Also known as
ODO1
Orthologs
fruit fly all
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Genomic context

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See Nc73EF in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
103 current Ccap_2.1 (GCF_000347755.3) Unplaced Scaffold NW_019376262.1 (148837..175012)

NW_019376262.1Genomic Context describing neighboring genes Neighboring gene Cuticular protein 73D Neighboring gene Odorant-binding protein 73a Neighboring gene uncharacterized LOC101454385 Neighboring gene protein OPI10 homolog Neighboring gene uncharacterized LOC105664762

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019376262 Unplaced Scaffold Reference Ccap_2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A genomic perspective to assessing quality of mass-reared SIT flies used in Mediterranean fruit fly (Ceratitis capitata) eradication in California. Calla B, et al. BMC Genomics, 2014 Feb 5. PMID 24495485, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxoglutarate dehydrogenase (succinyl-transferring) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of oxoglutarate dehydrogenase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-oxoglutarate dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ceratitis capitata Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ccap_2.1 Primary Assembly

Genomic

  1. NW_019376262.1 Reference Ccap_2.1 Primary Assembly

    Range
    148837..175012
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020858244.1 → XP_020713903.1  2-oxoglutarate dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    W8BZB1
    Related
    XP_020713903.1, XM_020858244.1
    Conserved Domains (1) summary
    PRK09404
    Location:53 → 984
    sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed

  2. XM_020858243.1 → XP_020713902.1  2-oxoglutarate dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    W8BZB1
    Related
    XP_020713902.1, XM_020858243.1
    Conserved Domains (1) summary
    PRK09404
    Location:53 → 984
    sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed

  3. XM_012300945.2 → XP_012156335.1  2-oxoglutarate dehydrogenase, mitochondrial isoform X4

    UniProtKB/TrEMBL
    W8C7N9
    Related
    XP_012156335.1, XM_012300945.2
    Conserved Domains (5) summary
    PRK09404
    Location:53 → 1019
    sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed
    cd02016
    Location:267 → 529
    TPP_E1_OGDC_like; Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC). OGDC catalyzes the oxidative decarboxylation of ...
    pfam02779
    Location:653 → 864
    Transket_pyr; Transketolase, pyrimidine binding domain
    pfam16078
    Location:53 → 86
    2-oxogl_dehyd_N; 2-oxoglutarate dehydrogenase N-terminus
    pfam16870
    Location:871 → 1018
    OxoGdeHyase_C; 2-oxoglutarate dehydrogenase C-terminal

  4. XM_020858246.1 → XP_020713905.1  2-oxoglutarate dehydrogenase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    W8BPJ7
    Related
    XP_020713905.1, XM_020858246.1
    Conserved Domains (1) summary
    PRK09404
    Location:53 → 975
    sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed

  5. XM_004523704.3 → XP_004523761.2  2-oxoglutarate dehydrogenase, mitochondrial isoform X3

    See identical proteins and their annotated locations for XP_004523761.2

    UniProtKB/TrEMBL
    W8BZB1
    Related
    XP_004523761.2, XM_004523704.3
    Conserved Domains (5) summary
    PRK09404
    Location:53 → 1094
    sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed
    cd02016
    Location:267 → 529
    TPP_E1_OGDC_like; Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC). OGDC catalyzes the oxidative decarboxylation of ...
    pfam02779
    Location:653 → 864
    Transket_pyr; Transketolase, pyrimidine binding domain
    pfam16078
    Location:53 → 86
    2-oxogl_dehyd_N; 2-oxoglutarate dehydrogenase N-terminus
    pfam16870
    Location:871 → 1094
    OxoGdeHyase_C; 2-oxoglutarate dehydrogenase C-terminal

  6. XM_020858247.1 → XP_020713906.1  2-oxoglutarate dehydrogenase, mitochondrial isoform X5

    UniProtKB/TrEMBL
    W8C7N9
    Related
    XP_020713906.1, XM_020858247.1
    Conserved Domains (1) summary
    PRK09404
    Location:53 → 1013
    sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed

  7. XM_004523705.3 → XP_004523762.2  2-oxoglutarate dehydrogenase, mitochondrial isoform X7

    UniProtKB/TrEMBL
    A0A811V3U8, W8BPJ7
    Related
    XP_004523762.2, XM_004523705.3
    Conserved Domains (1) summary
    PRK09404
    Location:53 → 1085
    sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed

  8. XM_004523707.3 → XP_004523764.2  2-oxoglutarate dehydrogenase, mitochondrial isoform X6

    UniProtKB/TrEMBL
    W8BIT2
    Related
    XP_004523764.2, XM_004523707.3
    Conserved Domains (5) summary
    PRK09404
    Location:53 → 1004
    sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed
    cd02016
    Location:258 → 520
    TPP_E1_OGDC_like; Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC). OGDC catalyzes the oxidative decarboxylation of ...
    pfam02779
    Location:644 → 855
    Transket_pyr; Transketolase, pyrimidine binding domain
    pfam16078
    Location:53 → 86
    2-oxogl_dehyd_N; 2-oxoglutarate dehydrogenase N-terminus
    pfam16870
    Location:862 → 1004
    OxoGdeHyase_C; 2-oxoglutarate dehydrogenase C-terminal

  9. XM_023302515.1 → XP_023158283.1  2-oxoglutarate dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    W8BZB1
    Related
    XP_023158283.1, XM_023302515.1
    Conserved Domains (1) summary
    PRK09404
    Location:53 → 984
    sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed

  10. XM_020858245.1 → XP_020713904.1  2-oxoglutarate dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    W8BZB1
    Related
    XP_020713904.1, XM_020858245.1
    Conserved Domains (1) summary
    PRK09404
    Location:53 → 984
    sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed
Nucleotide Protein
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