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AMPH amphiphysin [ Trichechus manatus latirostris (Florida manatee) ]

Gene ID: 101352735, updated on 8-Mar-2024

Summary

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Gene symbol
AMPH
Gene description
amphiphysin
See related
EnsemblRapid:ENSTMLG00000021241
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichechus manatus latirostris (sub-species: latirostris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Trichechidae; Trichechus
Orthologs
human mouse all
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Genomic context

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See AMPH in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_01 current TriManLat1.0 (GCF_000243295.1) Unplaced Scaffold NW_004444050.1 (50578..342539, complement)

NW_004444050.1Genomic Context describing neighboring genes Neighboring gene T cell receptor gamma variable 3 Neighboring gene transfer RNA arginine (anticodon UCU) Neighboring gene VPS41 subunit of HOPS complex Neighboring gene transfer RNA glycine (anticodon CCC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004444050 Unplaced Scaffold Reference TriManLat1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in synaptic vesicle endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
amphiphysin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000243295.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TriManLat1.0 Primary Assembly

Genomic

  1. NW_004444050.1 Reference TriManLat1.0 Primary Assembly

    Range
    50578..342539 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004383950.1 → XP_004384007.1  amphiphysin isoform X2

    UniProtKB/TrEMBL
    A0A2Y9DZI7
    Related
    ENSTMLP00000029963.1, ENSTMLT00000032154.1
    Conserved Domains (2) summary
    cd07611
    Location:26 → 236
    BAR_Amphiphysin_I_II; The Bin/Amphiphysin/Rvs (BAR) domain of Amphiphysin I and II
    cd12140
    Location:579 → 650
    SH3_Amphiphysin_I; Src Homology 3 domain of Amphiphysin I

  2. XM_004383949.1 → XP_004384006.1  amphiphysin isoform X1

    UniProtKB/TrEMBL
    A0A2Y9E0E2
    Related
    ENSTMLP00000029958.1, ENSTMLT00000032149.1
    Conserved Domains (2) summary
    cd07611
    Location:26 → 236
    BAR_Amphiphysin_I_II; The Bin/Amphiphysin/Rvs (BAR) domain of Amphiphysin I and II
    cd12140
    Location:621 → 692
    SH3_Amphiphysin_I; Src Homology 3 domain of Amphiphysin I
Nucleotide Protein
Heading Accession and Version

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