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LOC101294194 alanine aminotransferase 2 [ Fragaria vesca (wild strawberry) ]

Gene ID: 101294194, updated on 11-Jan-2024

Summary

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Gene symbol
LOC101294194
Gene description
alanine aminotransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Fragaria vesca
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Genomic context

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Location:
chromosome: LG6
Exon count:
15
Annotation release Status Assembly LG Location
101 current FraVesHawaii_1.0 (GCF_000184155.1) LG6 NC_020496.1 (25233672..25238307, complement)

Linkage Group LG6 - NC_020496.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101293323 Neighboring gene uncharacterized LOC101297280 Neighboring gene pectinesterase 3 Neighboring gene pectinesterase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_020496.1 Chromosome LG6 Reference FraVesHawaii_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-alanine:2-oxoglutarate aminotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alanine aminotransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fragaria vesca Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FraVesHawaii_1.0 Primary Assembly

Genomic

  1. NC_020496.1 Reference FraVesHawaii_1.0 Primary Assembly

    Range
    25233672..25238307 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004303708.2 → XP_004303756.1  alanine aminotransferase 2

    Conserved Domains (2) summary
    cd00609
    Location:154 → 530
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PLN02231
    Location:1 → 541
    PLN02231; alanine transaminase
Nucleotide Protein
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Gene LinkOut

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