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LOC101250664 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like [ Solanum lycopersicum (tomato) ]

Gene ID: 101250664, updated on 9-Nov-2023

Summary

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Gene symbol
LOC101250664
Gene description
1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum lycopersicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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Genomic context

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See LOC101250664 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
103 current SL3.0 (GCF_000188115.4) 3 NC_015440.3 (1038301..1039095, complement)
102 previous assembly SL2.50 (GCF_000188115.3) 3 NC_015440.2 (1038401..1039058, complement)

Chromosome 3 - NC_015440.3Genomic Context describing neighboring genes Neighboring gene origin of replication complex subunit 1A-like Neighboring gene small nucleolar RNA snoR28 Neighboring gene uncharacterized LOC101259611 Neighboring gene 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 Neighboring gene altered inheritance rate of mitochondria protein 25

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phylloquinone biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SL3.0 Primary Assembly

Genomic

  1. NC_015440.3 Reference SL3.0 Primary Assembly

    Range
    1038301..1039095 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004234209.4 → XP_004234257.1  1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like

    UniProtKB/TrEMBL
    A0A3Q7G1V2
    Conserved Domains (1) summary
    cl00509
    Location:11 → 159
    hot_dog; The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated ...
Nucleotide Protein
Heading Accession and Version

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