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POC1A POC1 centriolar protein A [ Taeniopygia guttata (zebra finch) ]

Gene ID: 101234082, updated on 8-Mar-2024

Summary

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Gene symbol
POC1A
Gene description
POC1 centriolar protein A
See related
Ensembl:ENSTGUG00000006036
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
12
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 12 NC_044224.2 (14329747..14374015)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 12 NC_045011.1 (14296665..14340939)

Chromosome 12 - NC_044224.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115496951 Neighboring gene heat shock transcription factor, Y-linked Neighboring gene uncharacterized LOC115496928 Neighboring gene dual specificity phosphatase 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
POC1 centriolar protein homolog A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044224.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    14329747..14374015
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004176297.5 → XP_004176345.2  POC1 centriolar protein homolog A isoform X1

    UniProtKB/TrEMBL
    A0A674GTN6, H0Z6M7
    Related
    ENSTGUP00000006225.2
    Conserved Domains (2) summary
    cd00200
    Location:11 → 299
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:22 → 59
    7WD40; WD40 repeat [structural motif]

  2. XM_030282939.3 → XP_030138799.1  POC1 centriolar protein homolog A isoform X2

    UniProtKB/TrEMBL
    A0A674GTN6
    Conserved Domains (2) summary
    cd00200
    Location:11 → 299
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:22 → 59
    7WD40; WD40 repeat [structural motif]

  3. XM_032750611.2 → XP_032606502.1  POC1 centriolar protein homolog A isoform X3

    Conserved Domains (2) summary
    cd00200
    Location:2 → 261
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:26 → 62
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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