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LOC101213906 probable galacturonosyltransferase 4 [ Cucumis sativus (cucumber) ]

Gene ID: 101213906, updated on 14-Dec-2023

Summary

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Gene symbol
LOC101213906
Gene description
probable galacturonosyltransferase 4
Locus tag
Csa_022782
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Cucumber_9930_V3 (GCF_000004075.3) 1 NC_026655.2 (11173757..11178611)
101 previous assembly ASM407v2 (GCF_000004075.2) 1 NC_026655.1 (10881182..10886052)

Chromosome 1 - NC_026655.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101215271 Neighboring gene serine/threonine-protein kinase D6PK Neighboring gene sodium/hydrogen exchanger 6 Neighboring gene oligopeptide transporter 3 Neighboring gene rhodanese-like domain-containing protein 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cucumber_9930_V3 Primary Assembly

Genomic

  1. NC_026655.2 Reference Cucumber_9930_V3 Primary Assembly

    Range
    11173757..11178611
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011656530.2 → XP_011654832.1  probable galacturonosyltransferase 4

    See identical proteins and their annotated locations for XP_011654832.1

    UniProtKB/TrEMBL
    A0A0A0LVQ9
    Conserved Domains (3) summary
    cd06429
    Location:342 → 636
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
    PLN02829
    Location:1 → 649
    PLN02829; Probable galacturonosyltransferase
    pfam11985
    Location:167 → 278
    DUF3486; Protein of unknown function (DUF3486)
Nucleotide Protein
Heading Accession and Version

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