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LOC101202827 glucan endo-1,3-beta-glucosidase 5 [ Cucumis sativus (cucumber) ]

Gene ID: 101202827, updated on 14-Dec-2023

Summary

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Gene symbol
LOC101202827
Gene description
glucan endo-1,3-beta-glucosidase 5
Locus tag
Csa_002300
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Cucumber_9930_V3 (GCF_000004075.3) 3 NC_026657.2 (38173563..38176341, complement)
101 previous assembly ASM407v2 (GCF_000004075.2) 3 NC_026657.1 (37105738..37108224, complement)

Chromosome 3 - NC_026657.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101215653 Neighboring gene probable E3 ubiquitin-protein ligase RZFP34 Neighboring gene FCS-Like Zinc finger 10 Neighboring gene uncharacterized LOC101215419 Neighboring gene potassium channel KAT3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucan endo-1,3-beta-glucosidase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cucumber_9930_V3 Primary Assembly

Genomic

  1. NC_026657.2 Reference Cucumber_9930_V3 Primary Assembly

    Range
    38173563..38176341 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004136283.3 → XP_004136331.1  glucan endo-1,3-beta-glucosidase 5

    See identical proteins and their annotated locations for XP_004136331.1

    UniProtKB/TrEMBL
    A0A0A0LGR2
    Conserved Domains (2) summary
    smart00768
    Location:367 → 451
    X8; Possibly involved in carbohydrate binding
    cl23725
    Location:29 → 346
    Glyco_hydro; Glycosyl hydrolases
Nucleotide Protein
Heading Accession and Version

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