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ATRX ATRX chromatin remodeler [ Felis catus (domestic cat) ]

Gene ID: 101086543, updated on 8-Mar-2024

Summary

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Official Symbol
ATRX
Official Full Name
ATRX chromatin remodeler
Primary source
VGNC:VGNC:68798
See related
EnsemblRapid:ENSFCTG00005000699
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
38
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) X NC_058386.1 (62771651..63083956, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) X NC_018741.3 (65186750..65501999, complement)

Chromosome X - NC_058386.1Genomic Context describing neighboring genes Neighboring gene T-complex protein 1 subunit zeta-like Neighboring gene fibroblast growth factor 16 Neighboring gene small nucleolar RNA U13 Neighboring gene U6 spliceosomal RNA Neighboring gene cytochrome c oxidase subunit 7B, mitochondrial Neighboring gene magnesium transporter 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcriptional regulator ATRX

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058386.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    62771651..63083956 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045051014.1 → XP_044906949.1  transcriptional regulator ATRX isoform X3

    UniProtKB/TrEMBL
    M3WSD9, M3WTQ4
    Related
    ENSFCTP00005001007.1, ENSFCTT00005001858.1
    Conserved Domains (5) summary
    PTZ00121
    Location:791 → 1438
    PTZ00121; MAEBL; Provisional
    COG0553
    Location:1528 → 2179
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    PTZ00108
    Location:897 → 1129
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd11726
    Location:166 → 269
    ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)
    cd18068
    Location:1553 → 1796
    DEXHc_ATRX; DEXH-box helicase domain of ATRX

  2. XM_045051016.1 → XP_044906951.1  transcriptional regulator ATRX isoform X5

    UniProtKB/TrEMBL
    M3WSD9
    Conserved Domains (5) summary
    PTZ00121
    Location:764 → 1411
    PTZ00121; MAEBL; Provisional
    COG0553
    Location:1501 → 2152
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    PTZ00108
    Location:870 → 1102
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd11726
    Location:139 → 242
    ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)
    cd18068
    Location:1526 → 1769
    DEXHc_ATRX; DEXH-box helicase domain of ATRX

  3. XM_045051015.1 → XP_044906950.1  transcriptional regulator ATRX isoform X4

    UniProtKB/TrEMBL
    M3WSD9
    Related
    ENSFCTP00005000998.1, ENSFCTT00005001849.1
    Conserved Domains (5) summary
    PTZ00121
    Location:765 → 1412
    PTZ00121; MAEBL; Provisional
    COG0553
    Location:1502 → 2153
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    PTZ00108
    Location:871 → 1103
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd11726
    Location:140 → 243
    ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)
    cd18068
    Location:1527 → 1770
    DEXHc_ATRX; DEXH-box helicase domain of ATRX

  4. XM_045051013.1 → XP_044906948.1  transcriptional regulator ATRX isoform X2

    UniProtKB/TrEMBL
    M3WSD9
    Conserved Domains (5) summary
    PTZ00121
    Location:802 → 1449
    PTZ00121; MAEBL; Provisional
    COG0553
    Location:1539 → 2190
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    PTZ00108
    Location:908 → 1140
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd11726
    Location:177 → 280
    ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)
    cd18068
    Location:1564 → 1807
    DEXHc_ATRX; DEXH-box helicase domain of ATRX

  5. XM_045051010.1 → XP_044906945.1  transcriptional regulator ATRX isoform X1

    UniProtKB/TrEMBL
    M3WSD9
    Conserved Domains (5) summary
    PTZ00121
    Location:803 → 1450
    PTZ00121; MAEBL; Provisional
    COG0553
    Location:1540 → 2191
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    PTZ00108
    Location:909 → 1141
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd11726
    Location:178 → 281
    ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)
    cd18068
    Location:1565 → 1808
    DEXHc_ATRX; DEXH-box helicase domain of ATRX

  6. XM_045051011.1 → XP_044906946.1  transcriptional regulator ATRX isoform X1

    UniProtKB/TrEMBL
    M3WSD9
    Related
    ENSFCTP00005000990.1, ENSFCTT00005001841.1
    Conserved Domains (5) summary
    PTZ00121
    Location:803 → 1450
    PTZ00121; MAEBL; Provisional
    COG0553
    Location:1540 → 2191
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    PTZ00108
    Location:909 → 1141
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd11726
    Location:178 → 281
    ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)
    cd18068
    Location:1565 → 1808
    DEXHc_ATRX; DEXH-box helicase domain of ATRX

  7. XM_045051012.1 → XP_044906947.1  transcriptional regulator ATRX isoform X1

    UniProtKB/TrEMBL
    M3WSD9
    Conserved Domains (5) summary
    PTZ00121
    Location:803 → 1450
    PTZ00121; MAEBL; Provisional
    COG0553
    Location:1540 → 2191
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    PTZ00108
    Location:909 → 1141
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd11726
    Location:178 → 281
    ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)
    cd18068
    Location:1565 → 1808
    DEXHc_ATRX; DEXH-box helicase domain of ATRX

  8. XM_045051018.1 → XP_044906953.1  transcriptional regulator ATRX isoform X6

    UniProtKB/TrEMBL
    M3WSD9
    Related
    ENSFCTP00005000991.1, ENSFCTT00005001842.1
    Conserved Domains (5) summary
    PTZ00121
    Location:752 → 1399
    PTZ00121; MAEBL; Provisional
    COG0553
    Location:1489 → 2140
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    PTZ00108
    Location:858 → 1090
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd11726
    Location:127 → 230
    ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)
    cd18068
    Location:1514 → 1757
    DEXHc_ATRX; DEXH-box helicase domain of ATRX

  9. XM_045051017.1 → XP_044906952.1  transcriptional regulator ATRX isoform X6

    UniProtKB/TrEMBL
    M3WSD9
    Conserved Domains (5) summary
    PTZ00121
    Location:752 → 1399
    PTZ00121; MAEBL; Provisional
    COG0553
    Location:1489 → 2140
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    PTZ00108
    Location:858 → 1090
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd11726
    Location:127 → 230
    ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)
    cd18068
    Location:1514 → 1757
    DEXHc_ATRX; DEXH-box helicase domain of ATRX

RNA

  1. XR_006593141.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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