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SBF1 SET binding factor 1 [ Felis catus (domestic cat) ]

Gene ID: 101084722, updated on 8-Mar-2024

Summary

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Official Symbol
SBF1
Official Full Name
SET binding factor 1
Primary source
VGNC:VGNC:64886
See related
EnsemblRapid:ENSFCTG00005015788
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See SBF1 in Genome Data Viewer
Location:
chromosome: B4
Exon count:
42
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) B4 NC_058374.1 (141804830..141832775, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) B4 NC_018729.3 (144190277..144218216, complement)

Chromosome B4 - NC_058374.1Genomic Context describing neighboring genes Neighboring gene DENN domain containing 6B Neighboring gene protein phosphatase 6 regulatory subunit 2 Neighboring gene uncharacterized LOC109501882 Neighboring gene adrenomedullin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
myotubularin-related protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058374.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    141804830..141832775 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045062578.1 → XP_044918513.1  myotubularin-related protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A5F5XU77
    Conserved Domains (6) summary
    smart00801
    Location:412 → 480
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:177 → 358
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    smart00800
    Location:72 → 134
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
    cd01235
    Location:1833 → 1938
    PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
    cl17171
    Location:940 → 1058
    PH-like; Pleckstrin homology-like domain
    cl28904
    Location:1197 → 1569
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  2. XM_023257664.2 → XP_023113432.2  myotubularin-related protein 5 isoform X3

    UniProtKB/TrEMBL
    A0A2I2U091
    Conserved Domains (6) summary
    smart00801
    Location:364 → 432
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:129 → 310
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    smart00800
    Location:1 → 86
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
    cd01235
    Location:1759 → 1864
    PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
    cl17171
    Location:892 → 1010
    PH-like; Pleckstrin homology-like domain
    cl28904
    Location:1149 → 1495
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  3. XM_023257663.2 → XP_023113431.2  myotubularin-related protein 5 isoform X2

    UniProtKB/TrEMBL
    A0A5F5XU77
    Related
    ENSFCTP00005032549.1, ENSFCTT00005045545.1
    Conserved Domains (6) summary
    smart00801
    Location:364 → 432
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:129 → 310
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    smart00800
    Location:1 → 86
    uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
    cd01235
    Location:1785 → 1890
    PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
    cl17171
    Location:892 → 1010
    PH-like; Pleckstrin homology-like domain
    cl28904
    Location:1149 → 1521
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
Nucleotide Protein
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