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tnpo3 transportin 3 [ Takifugu rubripes (torafugu) ]

Gene ID: 101080098, updated on 8-Mar-2024

Summary

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Gene symbol
tnpo3
Gene description
transportin 3
See related
Ensembl:ENSTRUG00000000485
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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See tnpo3 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
23
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 18 NC_042302.1 (10028370..10037259)
101 previous assembly FUGU5 (GCF_000180615.1) Unplaced Scaffold NW_004072899.1 (188..6429, complement)

Chromosome 18 - NC_042302.1Genomic Context describing neighboring genes Neighboring gene ADP-ribosylation factor 4 Neighboring gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 Neighboring gene ATPase H+ transporting V1 subunit F Neighboring gene interferon regulatory factor 5 Neighboring gene F-box protein 7 Neighboring gene kiaa0930

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transportin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042302.1 Reference fTakRub1.2 Primary Assembly

    Range
    10028370..10037259
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029825503.1 → XP_029681363.1  transportin-3

    UniProtKB/TrEMBL
    H2RLY5
    Related
    ENSTRUP00000001148.3, ENSTRUT00000001152.3
    Conserved Domains (2) summary
    smart00913
    Location:30 → 96
    IBN_N; Importin-beta N-terminal domain
    pfam08389
    Location:120 → 248
    Xpo1; Exportin 1-like protein
Nucleotide Protein
Heading Accession and Version

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