U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC101075407 uncharacterized LOC101075407 [ Takifugu rubripes (torafugu) ]

Gene ID: 101075407, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
LOC101075407
Gene description
uncharacterized LOC101075407
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Also known as
gp5
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC101075407 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
6
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 20 NC_042304.1 (9904119..9915008)
101 previous assembly FUGU5 (GCF_000180615.1) 20 NC_018909.1 (8391617..8393759, complement)

Chromosome 20 - NC_042304.1Genomic Context describing neighboring genes Neighboring gene prolyl 3-hydroxylase 2 Neighboring gene coiled-coil domain containing 50a Neighboring gene leucine-rich repeat-containing protein 15-like Neighboring gene leucine-rich repeat-containing protein 15-like Neighboring gene uncharacterized LOC115247148

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein LOC101075407
Names
glycoprotein V platelet

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042304.1 Reference fTakRub1.2 Primary Assembly

    Range
    9904119..9915008
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029828393.1 → XP_029684253.1  uncharacterized protein LOC101075407

    Conserved Domains (6) summary
    PRK15370
    Location:101 → 339
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    smart00082
    Location:1629 → 1678
    LRRCT; Leucine rich repeat C-terminal domain
    PLN00113
    Location:1324 → 1629
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00033
    Location:808 → 831
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:977 → 1033
    LRR_8; Leucine rich repeat
    cl15307
    Location:426 → 474
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.