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sqlea squalene epoxidase a [ Takifugu rubripes (torafugu) ]

Gene ID: 101073594, updated on 8-Mar-2024

Summary

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Gene symbol
sqlea
Gene description
squalene epoxidase a
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Also known as
sqle
Orthologs
human zebrafish all
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Genomic context

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See sqlea in Genome Data Viewer
Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 7 NC_042291.1 (7026145..7030058)
101 previous assembly FUGU5 (GCF_000180615.1) 7 NC_018896.1 (5507712..5511579)

Chromosome 7 - NC_042291.1Genomic Context describing neighboring genes Neighboring gene xylose isomerase-like Neighboring gene ring finger protein 144B Neighboring gene uncharacterized LOC105416640 Neighboring gene oxidation resistance 1a Neighboring gene uncharacterized LOC105416637 Neighboring gene zinc finger protein, FOG family member 2a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables squalene monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
squalene monooxygenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042291.1 Reference fTakRub1.2 Primary Assembly

    Range
    7026145..7030058
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029838266.1 → XP_029694126.1  squalene monooxygenase

    Conserved Domains (2) summary
    COG0644
    Location:118 → 417
    FixC; Dehydrogenase (flavoprotein) [Energy production and conversion]
    cl21454
    Location:270 → 540
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

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