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LINC02607 long intergenic non-protein coding RNA 2607 [ Homo sapiens (human) ]

Gene ID: 100996635, updated on 23-Nov-2021

Summary

Official Symbol
LINC02607provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2607provided by HGNC
Primary source
HGNC:HGNC:54049
See related
Ensembl:ENSG00000228971
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward brain (RPKM 5.2) See more
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Genomic context

See LINC02607 in Genome Data Viewer
Location:
1p21.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (95510116..95515464)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (95975672..95981020)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107985420 Neighboring gene long intergenic non-protein coding RNA 1761 Neighboring gene uncharacterized LOC101928219 Neighboring gene long intergenic non-protein coding RNA 2790

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110621.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AL356479, BC067883
    Related
    ENST00000411798.2
  2. NR_110622.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an internal exon and is shorter compared to variant 1.
    Source sequence(s)
    AL356479, BC045746, HY120625
    Related
    ENST00000653589.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    95510116..95515464
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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