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CTXND1 cortexin domain containing 1 [ Homo sapiens (human) ]

Gene ID: 100996492, updated on 23-Nov-2021

Summary

Official Symbol
CTXND1provided by HGNC
Official Full Name
cortexin domain containing 1provided by HGNC
Primary source
HGNC:HGNC:50507
See related
Ensembl:ENSG00000259417
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LINC01314
Expression
Biased expression in liver (RPKM 1.2), brain (RPKM 0.8) and 10 other tissues See more
Orthologs
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Genomic context

See CTXND1 in Genome Data Viewer
Location:
15q25.1
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 15 NC_000015.10 (80195481..80252213, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (80487823..80544555, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene zinc finger AN1-type containing 6 Neighboring gene Sharpr-MPRA regulatory region 12283 Neighboring gene fumarylacetoacetate hydrolase Neighboring gene long intergenic non-protein coding RNA 927 Neighboring gene uncharacterized LOC101929560

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General protein information

Preferred Names
cortexin domain-containing 1
Names
long intergenic non-protein coding RNA 1314

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001352888.2NP_001339817.1  cortexin domain-containing 1

    Status: VALIDATED

    Source sequence(s)
    AC087761
    Consensus CDS
    CCDS86481.1
    Related
    ENSP00000489837.1, ENST00000560778.3
    Conserved Domains (1) summary
    pfam11057
    Location:554
    Cortexin; Cortexin of kidney

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p13 Primary Assembly

    Range
    80195481..80252213 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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