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LOC100978774 patr class I histocompatibility antigen, alpha chain G [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100978774, updated on 6-Jun-2024

Summary

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Gene symbol
LOC100978774
Gene description
patr class I histocompatibility antigen, alpha chain G
See related
Ensembl:ENSPPAG00000031248
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
MHC-G
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Genomic context

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Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 5 NC_073254.2 (44431400..44435021)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 6 NC_073255.1 (40394759..40398938)

Chromosome 5 - NC_073254.2Genomic Context describing neighboring genes Neighboring gene HLA class I histocompatibility antigen, A alpha chain-like Neighboring gene large ribosomal subunit protein eL8-like Neighboring gene MHC class I polypeptide-related sequence B-like Neighboring gene putative HLA class I histocompatibility antigen, alpha chain H Neighboring gene uncharacterized LOC134730490 Neighboring gene class I histocompatibility antigen, Gogo-A*0101 alpha chain-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide antigen binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in antigen processing and presentation of endogenous peptide antigen via MHC class Ib IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of T cell mediated cytotoxicity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patr class I histocompatibility antigen, alpha chain G

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073254.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    44431400..44435021
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063604769.1 → XP_063460839.1  patr class I histocompatibility antigen, alpha chain G

    UniProtKB/TrEMBL
    A0A2R9AFZ9, A0A2R9AKU5
Nucleotide Protein
Heading Accession and Version

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