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ATP6V1B1 ATPase H+ transporting V1 subunit B1 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100976103, updated on 8-Mar-2024

Summary

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Gene symbol
ATP6V1B1
Gene description
ATPase H+ transporting V1 subunit B1
See related
Ensembl:ENSPPAG00000026048
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See ATP6V1B1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 12 NC_073261.2 (55422316..55451990, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 2A NC_073250.1 (55415443..55455984, complement)

Chromosome 12 - NC_073261.2Genomic Context describing neighboring genes Neighboring gene testis expressed 261 Neighboring gene ankyrin repeat domain 53 Neighboring gene elongin-C-like Neighboring gene uncharacterized LOC130541219 Neighboring gene small nucleolar RNA U13 Neighboring gene ventral anterior homeobox 2 Neighboring gene CD207 molecule Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ATP metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuolar acidification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proton-transporting V-type ATPase, V1 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit B, kidney isoform

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073261.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    55422316..55451990 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003830953.6 → XP_003831001.1  V-type proton ATPase subunit B, kidney isoform

    See identical proteins and their annotated locations for XP_003831001.1

    UniProtKB/TrEMBL
    A0A2R8ZSZ1
    Related
    ENSPPAP00000006998.1
    Conserved Domains (4) summary
    cd01135
    Location:112 → 395
    V_A-ATPase_B; V/A-type ATP synthase (non-catalytic) subunit B. These ATPases couple ATP hydrolysis to the build up of a H+ gradient, but V-type ATPases do not catalyze the reverse reaction. The Vacuolar (V-type) ATPase is found in the membranes of vacuoles, the golgi ...
    TIGR01040
    Location:40 → 503
    V-ATPase_V1_B; V-type (H+)-ATPase V1, B subunit
    pfam00306
    Location:410 → 503
    ATP-synt_ab_C; ATP synthase alpha/beta chain, C terminal domain
    pfam02874
    Location:44 → 110
    ATP-synt_ab_N; ATP synthase alpha/beta family, beta-barrel domain
Nucleotide Protein
Heading Accession and Version

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