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CLTRN collectrin, amino acid transport regulator [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100971158, updated on 6-Jun-2024

Summary

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Gene symbol
CLTRN
Gene description
collectrin, amino acid transport regulator
See related
Ensembl:ENSPPAG00000029681
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
TMEM27
Orthologs
human mouse all
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Genomic context

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See CLTRN in Genome Data Viewer
Location:
chromosome: X
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) X NC_073272.2 (17428298..17465905, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) X NC_073272.1 (17431727..17469290, complement)

Chromosome X - NC_073272.2Genomic Context describing neighboring genes Neighboring gene BMX non-receptor tyrosine kinase Neighboring gene angiotensin converting enzyme 2 Neighboring gene prothymosin alpha-like Neighboring gene uncharacterized LOC100973558 Neighboring gene small nucleolar RNA SNORA7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of amino acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collectrin
Names
transmembrane protein 27

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073272.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    17428298..17465905 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003805720.4 → XP_003805768.2  collectrin

    UniProtKB/TrEMBL
    A0A2R9A7Z1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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