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ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif 17 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100970283, updated on 8-Mar-2024

Summary

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Gene symbol
ADAMTS17
Gene description
ADAM metallopeptidase with thrombospondin type 1 motif 17
See related
Ensembl:ENSPPAG00000030123
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 16 NC_073265.2 (89565810..89941882, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 15 NC_073264.1 (93260946..93634190, complement)

Chromosome 16 - NC_073265.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117975955 Neighboring gene uncharacterized UBE2Q2P13 Neighboring gene uncharacterized LOC129394012 Neighboring gene uncharacterized LOC130540848 Neighboring gene ceramide synthase 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A disintegrin and metalloproteinase with thrombospondin motifs 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073265.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    89565810..89941882 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034939509.3 → XP_034795400.1  A disintegrin and metalloproteinase with thrombospondin motifs 17 isoform X2

    UniProtKB/TrEMBL
    A0A2R9A9H5
    Conserved Domains (6) summary
    smart00209
    Location:546 → 598
    TSP1; Thrombospondin type 1 repeats
    cd04273
    Location:232 → 449
    ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
    pfam05986
    Location:702 → 810
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam01562
    Location:81 → 180
    Pep_M12B_propep; Reprolysin family propeptide
    pfam17771
    Location:466 → 533
    ADAM_CR_2; ADAM cysteine-rich domain
    pfam19030
    Location:1003 → 1050
    TSP1_ADAMTS; Thrombospondin type 1 domain

  2. XM_034939508.3 → XP_034795399.1  A disintegrin and metalloproteinase with thrombospondin motifs 17 isoform X1

    UniProtKB/TrEMBL
    A0A2R9A9H5
    Conserved Domains (6) summary
    smart00209
    Location:546 → 598
    TSP1; Thrombospondin type 1 repeats
    cd04273
    Location:232 → 449
    ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
    pfam05986
    Location:737 → 833
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam01562
    Location:81 → 180
    Pep_M12B_propep; Reprolysin family propeptide
    pfam17771
    Location:466 → 533
    ADAM_CR_2; ADAM cysteine-rich domain
    pfam19030
    Location:1026 → 1073
    TSP1_ADAMTS; Thrombospondin type 1 domain
Nucleotide Protein
Heading Accession and Version

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