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AQP4 aquaporin 4 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100969962, updated on 8-Mar-2024

Summary

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Gene symbol
AQP4
Gene description
aquaporin 4
See related
Ensembl:ENSPPAG00000031870
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 17 NC_073266.2 (44280877..44294636, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 18 NC_073267.1 (29973472..29987231, complement)

Chromosome 17 - NC_073266.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134729226 Neighboring gene ubiquitin recognition factor in ER-associated degradation protein 1-like Neighboring gene uncharacterized LOC100971672 Neighboring gene carbohydrate sulfotransferase 9 Neighboring gene uncharacterized LOC130540988

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables water channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in water transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basolateral plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aquaporin-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073266.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    44280877..44294636 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003830269.6 → XP_003830317.1  aquaporin-4 isoform X1

    See identical proteins and their annotated locations for XP_003830317.1

    UniProtKB/TrEMBL
    A0A2R9AJM5, A0A2R9AJN0
    Related
    ENSPPAP00000017576.1
    Conserved Domains (1) summary
    pfam00230
    Location:31 → 248
    MIP; Major intrinsic protein

  2. XM_034943753.4 → XP_034799644.1  aquaporin-4 isoform X2

    UniProtKB/TrEMBL
    A0A2R9AJN0
    Conserved Domains (1) summary
    pfam00230
    Location:9 → 226
    MIP; Major intrinsic protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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