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THUMPD1 THUMP domain containing 1 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100933803, updated on 8-Mar-2024

Summary

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Gene symbol
THUMPD1
Gene description
THUMP domain containing 1
See related
Ensembl:ENSSHAG00000031765
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 1 NC_045426.1 (272086540..272094077)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 2 Unlocalized Scaffold NW_003823505.1 (76171..83974, complement)

Chromosome 1 - NC_045426.1Genomic Context describing neighboring genes Neighboring gene LYR motif containing 1 Neighboring gene defective in cullin neddylation 1 domain containing 3 Neighboring gene acyl-CoA synthetase medium chain family member 3 Neighboring gene ERI1 exoribonuclease family member 2 Neighboring gene acyl-CoA synthetase medium chain family member 1 Neighboring gene uncharacterized LOC116419904 Neighboring gene acyl-coenzyme A synthetase ACSM2A, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
THUMP domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045426.1 Reference mSarHar1.11 Primary Assembly

    Range
    272086540..272094077
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003761452.4 → XP_003761500.1  THUMP domain-containing protein 1

    UniProtKB/TrEMBL
    A0A7N4NQ72
    Related
    ENSSHAP00000026153.1, ENSSHAT00000024419.1
    Conserved Domains (1) summary
    cd11717
    Location:45 → 254
    THUMP_THUMPD1_like; THUMP domain-containing protein 1-like
Nucleotide Protein
Heading Accession and Version

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