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RASA2-IT1 RASA2 intronic transcript 1 [ Homo sapiens (human) ]

Gene ID: 100874298, updated on 12-Sep-2024

Summary

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Official Symbol
RASA2-IT1provided by HGNC
Official Full Name
RASA2 intronic transcript 1provided by HGNC
Primary source
HGNC:HGNC:41376
See related
Ensembl:ENSG00000250170 AllianceGenome:HGNC:41376
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RASA2-IT1 in Genome Data Viewer
Location:
3q23
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (141525133..141526121)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (144272822..144273810)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (141243975..141244963)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene keratin 18 pseudogene 35 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14777 Neighboring gene RAS p21 protein activator 2 Neighboring gene putative uncharacterized protein MSANTD5 Neighboring gene YWHAQ pseudogene 6 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:141382574-141383094 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:141383095-141383614 Neighboring gene leucine rich repeat containing 78, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20633 Neighboring gene TPT1 pseudogene 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • RASA2 intronic transcript 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046792.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010184
    Related
    ENST00000507770.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    141525133..141526121
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    144272822..144273810
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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