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VAV3-AS1 VAV3 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100873946, updated on 23-Nov-2021

Summary

Official Symbol
VAV3-AS1provided by HGNC
Official Full Name
VAV3 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:40608
See related
Ensembl:ENSG00000230489
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See VAV3-AS1 in Genome Data Viewer
Location:
1p13.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (107964443..107994607)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (108507065..108537229)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene vav guanine nucleotide exchange factor 3 Neighboring gene microRNA 7852 Neighboring gene tRNA-undetermined (NNN) 8-1 Neighboring gene Sharpr-MPRA regulatory region 13935 Neighboring gene long intergenic non-protein coding RNA 2785 Neighboring gene solute carrier family 25 member 24 Neighboring gene Sharpr-MPRA regulatory region 7876

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046653.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BG193383, CR744964
    Related
    ENST00000438318.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    107964443..107994607
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_017852928.1 Reference GRCh38.p13 PATCHES

    Range
    5679..6783
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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