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LOC100813637 DNA-3-methyladenine glycosylase I-like [ Glycine max (soybean) ]

Gene ID: 100813637, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100813637
Gene description
DNA-3-methyladenine glycosylase I-like
Locus tag
GLYMA_08G263200v4
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 8 NC_038244.2 (28644923..28648886)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 8 NC_038244.1 (28526852..28530815)

Chromosome 8 - NC_038244.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene DNA-directed RNA polymerase 1B, mitochondrial Neighboring gene uncharacterized LOC121175250 Neighboring gene uncharacterized LOC100817891

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-3-methyladenine glycosylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in base-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-3-methyladenine glycosylase I-like
Names
probable GMP synthase [glutamine-hydrolyzing]-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001253079.2 → NP_001240008.1  DNA-3-methyladenine glycosylase I-like

    See identical proteins and their annotated locations for NP_001240008.1

    Status: VALIDATED

    Source sequence(s)
    ACUP04002896
    UniProtKB/TrEMBL
    C6TKE8
    Conserved Domains (1) summary
    pfam03352
    Location:122 → 300
    Adenine_glyco; Methyladenine glycosylase

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038244.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    28644923..28648886
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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