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LOC100809786 uncharacterized LOC100809786 [ Glycine max (soybean) ]

Gene ID: 100809786, updated on 18-Aug-2023

Summary

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Gene symbol
LOC100809786
Gene description
uncharacterized LOC100809786
Locus tag
GLYMA_09G244700v4
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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Location:
chromosome: 9
Exon count:
5
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 9 NC_038245.2 (47084893..47089909, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 9 NC_038245.1 (46699731..46704748, complement)

Chromosome 9 - NC_038245.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102663503 Neighboring gene uncharacterized LOC100805155 Neighboring gene cysteine protease ATG4 Neighboring gene 2-dehydro-3-deoxyphosphooctonate aldolase-like protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing and analysis of approximately 40,000 soybean cDNA clones from a full-length-enriched cDNA library. Umezawa T, et al. DNA Res, 2008 Dec. PMID 18927222, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC100809786

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001255175.3 → NP_001242104.2  uncharacterized protein LOC100809786

    Status: VALIDATED

    Source sequence(s)
    ACUP04003386, BT095787, BW665520
    UniProtKB/TrEMBL
    C6TDW9, K7LFV6
    Conserved Domains (2) summary
    pfam08590
    Location:245 → 306
    DUF1771; Domain of unknown function (DUF1771)
    cl02619
    Location:312 → 420
    Smr; Smr domain

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038245.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    47084893..47089909 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006586636.4 → XP_006586699.1  uncharacterized protein LOC100809786 isoform X2

    UniProtKB/TrEMBL
    C6TDW9, I1L642
    Conserved Domains (2) summary
    pfam08590
    Location:245 → 306
    DUF1771; Domain of unknown function (DUF1771)
    cl02619
    Location:312 → 407
    Smr; Smr domain

  2. XM_014761541.3 → XP_014617027.2  uncharacterized protein LOC100809786 isoform X1

    UniProtKB/TrEMBL
    C6TDW9, K7LFV6
    Conserved Domains (2) summary
    pfam08590
    Location:245 → 306
    DUF1771; Domain of unknown function (DUF1771)
    cl02619
    Location:312 → 420
    Smr; Smr domain
Nucleotide Protein
Heading Accession and Version

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