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LOC100808086 uroporphyrinogen-III synthase, chloroplastic [ Glycine max (soybean) ]

Gene ID: 100808086, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100808086
Gene description
uroporphyrinogen-III synthase, chloroplastic
Locus tag
GLYMA_04G037000v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 4 NC_016091.4 (2922784..2930614, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 4 NC_016091.3 (2935895..2943822, complement)

Chromosome 4 - NC_016091.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100782262 Neighboring gene uncharacterized LOC100807554 Neighboring gene polyadenylate-binding protein RBP47C Neighboring gene precursor of CEP1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables uroporphyrinogen-III synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in uroporphyrinogen III biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uroporphyrinogen-III synthase, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_016091.4 Reference Glycine_max_v4.0 Primary Assembly

    Range
    2922784..2930614 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003523545.5 → XP_003523593.1  uroporphyrinogen-III synthase, chloroplastic isoform X1

    UniProtKB/TrEMBL
    K7KHX5, K7KSX4
    Conserved Domains (1) summary
    cd06578
    Location:53 → 288
    HemD; Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear) to uroporphyrinogen-III, the fourth step in the biosynthesis of heme. This ubiquitous enzyme is present in eukaryotes, bacteria and archaea. Mutations in ...

  2. XM_006577948.4 → XP_006578011.1  uroporphyrinogen-III synthase, chloroplastic isoform X2

    UniProtKB/TrEMBL
    A0A0R0K3E2
    Conserved Domains (1) summary
    cd06578
    Location:53 → 242
    HemD; Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear) to uroporphyrinogen-III, the fourth step in the biosynthesis of heme. This ubiquitous enzyme is present in eukaryotes, bacteria and archaea. Mutations in ...
Nucleotide Protein
Heading Accession and Version

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