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LOC100790340 carbonyl reductase [NADPH] 1 [ Glycine max (soybean) ]

Gene ID: 100790340, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100790340
Gene description
carbonyl reductase [NADPH] 1
Locus tag
GLYMA_09G117300v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100790340 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 9 NC_038245.2 (28478749..28482192)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 9 NC_038245.1 (27564063..27567558)

Chromosome 9 - NC_038245.2Genomic Context describing neighboring genes Neighboring gene protein MAIN-LIKE 1-like Neighboring gene B3 domain-containing transcription factor VRN1 Neighboring gene cytochrome P450 734A1 Neighboring gene nudix hydrolase 25

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbonyl reductase [NADPH] 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038245.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    28478749..28482192
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003533889.5 → XP_003533937.1  carbonyl reductase [NADPH] 1

    See identical proteins and their annotated locations for XP_003533937.1

    UniProtKB/TrEMBL
    C6TL79, I1L2S0
    Conserved Domains (1) summary
    cd05324
    Location:38 → 313
    carb_red_PTCR-like_SDR_c; Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs
Nucleotide Protein
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