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LINC00702 long intergenic non-protein coding RNA 702 [ Homo sapiens (human) ]

Gene ID: 100652988, updated on 17-Sep-2024

Summary

Official Symbol
LINC00702provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 702provided by HGNC
Primary source
HGNC:HGNC:44676
See related
AllianceGenome:HGNC:44676
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in heart (RPKM 6.6), fat (RPKM 1.9) and 10 other tissues See more
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Genomic context

See LINC00702 in Genome Data Viewer
Location:
10p15.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (4206876..4243912, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (4211048..4248084, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (4249068..4286104, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984195 Neighboring gene NANOG hESC enhancer GRCh37_chr10:4125610-4126122 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr10:4140042-4141241 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:4169977-4170616 Neighboring gene Sharpr-MPRA regulatory region 11939 Neighboring gene uncharacterized LOC105376368 Neighboring gene NANOG hESC enhancer GRCh37_chr10:4262043-4262553 Neighboring gene uncharacterized LOC105376369 Neighboring gene uncharacterized LOC105376370

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_108040.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    DA853538

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    4206876..4243912 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    4211048..4248084 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)