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DNM3OS DNM3 opposite strand/antisense RNA [ Homo sapiens (human) ]

Gene ID: 100628315, updated on 22-May-2022

Summary

Official Symbol
DNM3OSprovided by HGNC
Official Full Name
DNM3 opposite strand/antisense RNAprovided by HGNC
Primary source
HGNC:HGNC:41228
See related
AllianceGenome:HGNC:41228
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
DNM3-AS1; MIR199A2HG
Summary
Predicted to act upstream of or within bone mineralization and skeletal system development. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in ovary (RPKM 8.5), endometrium (RPKM 7.1) and 20 other tissues See more
Orthologs
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Genomic context

See DNM3OS in Genome Data Viewer
Location:
1q24.3
Exon count:
4
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (172136879..172144835, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (171493599..171501554, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (172106019..172113975, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ribosomal protein lateral stalk subunit P1 pseudogene 3 Neighboring gene DNM3 intronic transcript 1 Neighboring gene dynamin 3 Neighboring gene microRNA 199a-2 Neighboring gene microRNA 3120 Neighboring gene microRNA 214 Neighboring gene RNA, U6 small nuclear 157, pseudogene Neighboring gene uncharacterized LOC102724528 Neighboring gene chromosome 1 open reading frame 105

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Homology

Other Names

  • DNM3 antisense RNA 1 (non-protein coding)
  • DNM3 opposite strand/antisense RNA (non-protein coding)
  • MIR199A2 host gene (non-protein coding)
  • dynamin 3, opposite strand

Clone Names

  • FLJ11481

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in miRNA-mediated gene silencing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of RISC complex IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038397.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AL137157, AU311708, FJ623959
  2. NR_103486.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks three alternate segments, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AL137157, AU311708, DB261523, FJ623959

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    172136879..172144835 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    171493599..171501554 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)