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ARSE arylsulfatase E (chondrodysplasia punctata 1) [ Sus scrofa (pig) ]

Gene ID: 100627778, updated on 16-Nov-2023

Summary

Gene symbol
ARSE
Gene description
arylsulfatase E (chondrodysplasia punctata 1)
See related
Ensembl:ENSSSCG00000022129
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Broad expression in ovary (RPKM 4.0), lung (RPKM 3.4) and 6 other tissues See more
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Genomic context

Location:
chromosome: X
Exon count:
12
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) X NC_010461.5 (131769..156083, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) Unplaced Scaffold NW_003541028.1 (2787..13065)

Chromosome X - NC_010461.5Genomic Context describing neighboring genes Neighboring gene arylsulfatase D Neighboring gene uncharacterized LOC110257664 Neighboring gene arylsulfatase F-like Neighboring gene uncharacterized LOC110257789

Genomic regions, transcripts, and products

Expression

  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

General protein information

Preferred Names
arylsulfatase E
NP_001231049.1
XP_020935144.1
XP_020935145.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001244120.1NP_001231049.1  arylsulfatase E precursor

    Status: PROVISIONAL

    Source sequence(s)
    AK351260
    UniProtKB/TrEMBL
    A0A4X1TTK6, A0A8D1HRK7
    Related
    ENSSSCP00000020172.4, ENSSSCT00000025117.4
    Conserved Domains (2) summary
    COG3119
    Location:30558
    AslA; Arylsulfatase A or related enzyme [Inorganic ion transport and metabolism]
    cl23718
    Location:33556
    ALP_like; alkaline phosphatases and sulfatases

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010461.5 Reference Sscrofa11.1 Primary Assembly

    Range
    131769..156083 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021079485.1XP_020935144.1  arylsulfatase E isoform X1

    UniProtKB/TrEMBL
    A0A480K2M6, A0A8D1HRK7, A0A8D1XYE3, I3L814
    Conserved Domains (1) summary
    cl23718
    Location:33556
    ALP_like; alkaline phosphatases and sulfatases
  2. XM_021079486.1XP_020935145.1  arylsulfatase E isoform X2

    UniProtKB/TrEMBL
    A0A8D0U892
    Related
    ENSSSCP00000061933.2, ENSSSCT00000071026.2
    Conserved Domains (1) summary
    cl23718
    Location:30553
    ALP_like; alkaline phosphatases and sulfatases