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PRKCZ-AS1 PRKCZ antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100506504, updated on 23-Nov-2021

Summary

Official Symbol
PRKCZ-AS1provided by HGNC
Official Full Name
PRKCZ antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:40477
See related
Ensembl:ENSG00000182873
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in testis (RPKM 2.5), small intestine (RPKM 2.2) and 23 other tissues See more
Orthologs
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Genomic context

See PRKCZ-AS1 in Genome Data Viewer
Location:
1p36.33
Exon count:
2
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (2181794..2183875, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (2113233..2115314, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105378590 Neighboring gene PRKCZ divergent transcript Neighboring gene protein kinase C zeta Neighboring gene uncharacterized LOC112268219 Neighboring gene FA core complex associated protein 20 Neighboring gene uncharacterized LOC105378593

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

Clone Names

  • FLJ10346, FLJ14128

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_146290.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK001208
    Related
    ENST00000333854.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    2181794..2183875 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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