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LINC03106 long intergenic non-protein coding RNA 3106 [ Homo sapiens (human) ]

Gene ID: 100506422, updated on 10-Oct-2023

Summary

Official Symbol
LINC03106provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 3106provided by HGNC
Primary source
HGNC:HGNC:56836
See related
Ensembl:ENSG00000276759
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See LINC03106 in Genome Data Viewer
Location:
9p21.2
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (26066675..26118408)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (26077177..26128896)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (26066673..26118406)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1241 Neighboring gene Sharpr-MPRA regulatory region 6427 Neighboring gene GARIN3 pseudogene 1 Neighboring gene uncharacterized LOC107987027 Neighboring gene uncharacterized LOC105375999

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • dUTPase-like protein
  • putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323
  • putative inactive deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323

Clone Names

  • FLJ16323

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_170894.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL353753, AL356791
    Related
    ENST00000612217.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    26066675..26118408
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    26077177..26128896
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001004352.2: Suppressed sequence

    Description
    NM_001004352.2: This RefSeq was removed because it is now thought that this gene does not encode a protein.