Format

Send to:

Choose Destination

LINC00645 long intergenic non-protein coding RNA 645 [ Homo sapiens (human) ]

Gene ID: 100505967, updated on 25-Jan-2022

Summary

Official Symbol
LINC00645provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 645provided by HGNC
Primary source
HGNC:HGNC:44299
See related
Ensembl:ENSG00000258548 AllianceGenome:HGNC:44299
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in kidney (RPKM 4.3) and endometrium (RPKM 0.8) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LINC00645 in Genome Data Viewer
Location:
14q12
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 14 NC_000014.9 (27612588..27639636)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (28081794..28108842)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370421 Neighboring gene RPS27A pseudogene 4 Neighboring gene uncharacterized LOC728755 Neighboring gene microRNA 3171 Neighboring gene BCL2 interacting protein 3 pseudogene 1 Neighboring gene ribosomal protein L26 pseudogene 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_039992.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC042069, BX538073, BX538140, KF455842
    Related
    ENST00000557399.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p13 Primary Assembly

    Range
    27612588..27639636
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center