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LOC100505501 uncharacterized LOC100505501 [ Homo sapiens (human) ]

Gene ID: 100505501, updated on 11-Jun-2021

Summary

Gene symbol
LOC100505501
Gene description
uncharacterized LOC100505501
See related
Ensembl:ENSG00000167912
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in lymph node (RPKM 3.2), brain (RPKM 2.9) and 19 other tissues See more
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Genomic context

See LOC100505501 in Genome Data Viewer
Location:
8q12.1
Exon count:
3
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 8 NC_000008.11 (59119210..59123478)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (60031769..60036037)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene RNA, U4 small nuclear 50, pseudogene Neighboring gene thymocyte selection associated high mobility group box Neighboring gene VISTA enhancer hs1326 Neighboring gene RNA, 5S ribosomal pseudogene 267 Neighboring gene nudix hydrolase 15 pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_149030.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC087698, AC090152
    Related
    ENST00000665670.1
  2. NR_149031.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC087698, AC090152

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p13 Primary Assembly

    Range
    59119210..59123478
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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