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Krtap4-27 keratin associated protein 4-27 [ Mus musculus (house mouse) ]

Gene ID: 100502865, updated on 17-Aug-2024

Summary

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Official Symbol
Krtap4-27provided by MGI
Official Full Name
keratin associated protein 4-27provided by MGI
Primary source
MGI:MGI:1916701
See related
Ensembl:ENSMUSG00000078257 AllianceGenome:MGI:1916701
Gene type
protein coding
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2300003K06Rik
Orthologs
human all
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Genomic context

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Location:
11 D; 11 63.18 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (99727974..99728892, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (99837148..99838066, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene keratin associated protein 4-13 Neighboring gene keratin associated protein 4-26 Neighboring gene STARR-seq mESC enhancer starr_30708 Neighboring gene small ubiquitin-related modifier 2-like Neighboring gene keratin associated protein 4-16

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An updated nomenclature for keratin-associated proteins (KAPs). Gong H, et al. Int J Biol Sci, 2012. PMID 22298953, Free PMC Article
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
keratin associated protein 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001195383.1 → NP_001182312.1  keratin associated protein 4-like

    See identical proteins and their annotated locations for NP_001182312.1

    Status: INFERRED

    Source sequence(s)
    AL590992
    Consensus CDS
    CCDS70307.1
    UniProtKB/TrEMBL
    A2A4M0
    Related
    ENSMUSP00000100675.2, ENSMUST00000105054.3
    Conserved Domains (2) summary
    pfam01500
    Location:18 → 222
    Keratin_B2; Keratin, high sulfur B2 protein
    pfam13885
    Location:178 → 222
    Keratin_B2_2; Keratin, high sulfur B2 protein

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    99727974..99728892 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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