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LINC00987 long intergenic non-protein coding RNA 987 [ Homo sapiens (human) ]

Gene ID: 100499405, updated on 13-May-2022

Summary

Official Symbol
LINC00987provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 987provided by HGNC
Primary source
HGNC:HGNC:48911
See related
Ensembl:ENSG00000237248 AllianceGenome:HGNC:48911
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in gall bladder (RPKM 3.1), spleen (RPKM 2.8) and 25 other tissues See more
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Genomic context

See LINC00987 in Genome Data Viewer
Location:
12p13.31
Exon count:
8
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (9240073..9262901)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (9222589..9245418)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (9392669..9415497)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene alpha-2-macroglobulin pseudogene 1 Neighboring gene microRNA 1244-3 Neighboring gene pregnancy zone protein-like Neighboring gene prothymosin alpha pseudogene 4 Neighboring gene DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11-like Neighboring gene uncharacterized LOC105369649

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_036466.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010175
    Related
    ENST00000427111.4
  2. NR_137429.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010175
  3. NR_137430.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010175
  4. NR_137431.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010175
  5. NR_137432.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010175
  6. NR_137433.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010175
  7. NR_137434.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010175
  8. NR_137435.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010175
  9. NR_137436.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010175

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    9240073..9262901
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    9222589..9245418
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)