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b4galnt2 beta-1,4-N-acetyl-galactosaminyl transferase 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100493488, updated on 17-Aug-2024

Summary

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Official Symbol
b4galnt2provided by Xenbase
Official Full Name
beta-1,4-N-acetyl-galactosaminyl transferase 2provided by Xenbase
Primary source
Xenbase:XB-GENE-987283
See related
Ensembl:ENSXETG00000033376
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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See b4galnt2 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
10
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 10 NC_030686.2 (13788477..13841528, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 10 NC_030686.1 (10458068..10507277)

Chromosome 10 - NC_030686.2Genomic Context describing neighboring genes Neighboring gene lysozyme C Neighboring gene transfer RNA glutamine (anticodon UUG) Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene transfer RNA cysteine (anticodon GCA)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within lipid glycosylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
beta-1,4 N-acetylgalactosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030686.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    13788477..13841528 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002935708.5 → XP_002935754.2  beta-1,4 N-acetylgalactosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A6I8QM48, A0A803JZC9
    Related
    ENSXETP00000073371.2, ENSXETT00000068118.2
    Conserved Domains (1) summary
    pfam00535
    Location:269 → 370
    Glycos_transf_2; Glycosyl transferase family 2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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