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slc4a1 solute carrier family 4 member 1 (Diego blood group) [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100486998, updated on 17-Aug-2024

Summary

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Official Symbol
slc4a1provided by Xenbase
Official Full Name
solute carrier family 4 member 1 (Diego blood group)provided by Xenbase
Primary source
Xenbase:XB-GENE-986935
See related
Ensembl:ENSXETG00000007364
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
ae1; wd1; bnd3; epb3; cd233; empb3; rta1a
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
24
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 10 NC_030686.2 (18537604..18568829, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 10 NC_030686.1 (14238483..14269741, complement)

Chromosome 10 - NC_030686.2Genomic Context describing neighboring genes Neighboring gene ataxin 7-like 3 Neighboring gene upstream binding transcription factor Neighboring gene RUN domain containing 3A Neighboring gene WAP four-disulfide core domain protein 3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
  
enables monoatomic anion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables solute:inorganic anion antiporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within monoatomic anion transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
band 3 anion transport protein
Names
anion exchanger 1
band 3 anion exchanger
solute carrier family 4 (anion exchanger), member 1 (Diego blood group)
solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030686.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    18537604..18568829 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002935535.5 → XP_002935581.2  band 3 anion transport protein isoform X1

    UniProtKB/TrEMBL
    A0A6I8QVY8
    Related
    ENSXETP00000077637.2, ENSXETT00000091893.2
    Conserved Domains (3) summary
    TIGR00834
    Location:114 → 945
    ae; anion exchange protein
    pfam00955
    Location:409 → 874
    HCO3_cotransp; HCO3- transporter family
    pfam07565
    Location:150 → 367
    Band_3_cyto; Band 3 cytoplasmic domain

  2. XM_018097899.2 → XP_017953388.1  band 3 anion transport protein isoform X3

    UniProtKB/TrEMBL
    A0A6I8RJY8
    Related
    ENSXETP00000085626.2, ENSXETT00000069050.2
    Conserved Domains (1) summary
    cl26877
    Location:64 → 895
    Band_3_cyto; Band 3 cytoplasmic domain

  3. XM_031894242.1 → XP_031750102.1  band 3 anion transport protein isoform X4

    UniProtKB/TrEMBL
    A0A8J1IWX0
    Conserved Domains (1) summary
    cl26877
    Location:46 → 877
    Band_3_cyto; Band 3 cytoplasmic domain

  4. XM_031894243.1 → XP_031750103.1  band 3 anion transport protein isoform X5

    UniProtKB/TrEMBL
    A0A6I8QVM6
    Related
    ENSXETP00000073665.2, ENSXETT00000084378.2
    Conserved Domains (1) summary
    cl26877
    Location:46 → 877
    Band_3_cyto; Band 3 cytoplasmic domain

  5. XM_018097898.2 → XP_017953387.2  band 3 anion transport protein isoform X2

    UniProtKB/TrEMBL
    A0A8J0T6J6
    Conserved Domains (1) summary
    cl26877
    Location:78 → 909
    Band_3_cyto; Band 3 cytoplasmic domain

  6. XM_018097900.2 → XP_017953389.1  band 3 anion transport protein isoform X6

    UniProtKB/TrEMBL
    A0A8J0T4B8
    Conserved Domains (1) summary
    cl26877
    Location:21 → 852
    Band_3_cyto; Band 3 cytoplasmic domain
Nucleotide Protein Strain
Heading Accession and Version

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