U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

BARHL2 BarH like homeobox 2 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100458718, updated on 26-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
BARHL2
Gene description
BarH like homeobox 2
Locus tag
CR201_G0020077
See related
Ensembl:ENSPPYG00000001165
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See BARHL2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 1 NC_071985.2 (142267956..142273935)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 1 NC_071985.1 (142274865..142280844)

Chromosome 1 - NC_071985.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100936397 Neighboring gene uncharacterized LOC129047418 Neighboring gene uncharacterized LOC129050090 Neighboring gene small nucleolar RNA U3 Neighboring gene uncharacterized LOC129050093

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
barH-like 2 homeobox protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071985.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    142267956..142273935
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002810618.2 → XP_002810664.1  barH-like 2 homeobox protein

    UniProtKB/TrEMBL
    A0A2J8VD39, A0A6D2X4F8, H2N6T3
    Related
    ENSPPYP00000001349.2
    Conserved Domains (1) summary
    pfam00046
    Location:236 → 288
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials